TY - JOUR
T1 - CELL ELECTROPERMEABILIZATION MODELING VIA MULTIPLE TRACES FORMULATION AND TIME SEMI-IMPLICIT MULTISTEP COUPLING
AU - Martínez Ávila, Isabel A.
AU - Jerez-Hanckes, Carlos
AU - Pettersson, Irina
N1 - Publisher Copyright:
© 2024 Society for Industrial and Applied Mathematics.
PY - 2024
Y1 - 2024
N2 - We simulate the electrical response of multiple disjoint biological three-dimensional cells undergoing an electropermeabilization process. Instead of solving the boundary value problem in the unbounded volume, we reduce it to a system of boundary integrals equations___the local multiple traces formulation___coupled with nonlinear dynamics on the cell membranes. Though in time the model is highly nonlinear and poorly regular, the smooth geometry allows for boundary unknowns to be spatially approximated by spherical harmonics. This leads to spectral convergence rates in space. In time, we use a multistep semi-implicit scheme. To ensure stability, the time step needs to be bounded by the smallest characteristic time of the system. Numerical results are provided to validate our claims, and future enhancements are pointed out.
AB - We simulate the electrical response of multiple disjoint biological three-dimensional cells undergoing an electropermeabilization process. Instead of solving the boundary value problem in the unbounded volume, we reduce it to a system of boundary integrals equations___the local multiple traces formulation___coupled with nonlinear dynamics on the cell membranes. Though in time the model is highly nonlinear and poorly regular, the smooth geometry allows for boundary unknowns to be spatially approximated by spherical harmonics. This leads to spectral convergence rates in space. In time, we use a multistep semi-implicit scheme. To ensure stability, the time step needs to be bounded by the smallest characteristic time of the system. Numerical results are provided to validate our claims, and future enhancements are pointed out.
KW - boundary integral equations
KW - electropermeabilization
KW - multiple traces formulation
KW - multistep methods
KW - semi-implicit scheme
KW - transmembrane potential
UR - http://www.scopus.com/inward/record.url?scp=85215577141&partnerID=8YFLogxK
U2 - 10.1137/23M1570260
DO - 10.1137/23M1570260
M3 - Article
AN - SCOPUS:85215577141
SN - 1064-8275
VL - 46
SP - B953-B980
JO - SIAM Journal on Scientific Computing
JF - SIAM Journal on Scientific Computing
IS - 6
ER -