Multifaceted exploration of acylthiourea compounds: In vitro cytotoxicity, DFT calculations, molecular docking and dynamics simulation studies

Jebiti Haribabu, Geetha Madhavan, Srividya Swaminathan, Murugesan Panneerselvam, Daniel Moraga, Gayathri Dasararaju, Cesar Echeverria, Arunachalam Arulraj, Ramalinga Viswanathan Mangalaraja, Varaprasad Kokkarachedu, Juan F. Santibanez, Rodrigo Ramirez-Tagle

Research output: Contribution to journalArticlepeer-review

Abstract

This study reports the synthesis and analysis of biologically active acylthiourea compounds (1 and 2) with a cyclohexyl moiety. The compounds were characterized using UV–Visible, FT-IR, 1H/13C NMR, and elemental analysis. The crystal structure of 2 was solved, revealing intra- and inter-molecular hydrogen bonds. Density functional theory (DFT) calculations provided insights into chemical reactivity and non-covalent interactions. Cytotoxicity assays showed the cyclohexyl group enhanced the activity of compound 2 compared to compound 1. Epoxide hydrolase 1 was predicted as the enzyme target for both compounds. We modeled the structure of epoxide hydrolase 1 and performed molecular dynamics simulation and docking studies. Additionally, in silico docking with SARS-CoV-2 main protease, human ACE2, and avian influenza H5N1 hemagglutinin indicated strong binding potential of the compounds. This integrated approach improves our understanding of the biological potential of acylthiourea derivatives.

Original languageEnglish
Article number134870
JournalInternational Journal of Biological Macromolecules
Volume278
DOIs
StatePublished - Oct 2024
Externally publishedYes

Keywords

  • ACE2
  • Acylthiourea
  • Avian influenza H5N1 hemagglutinin
  • Cytotoxicity
  • Epoxide hydrolase 1
  • Molecular dynamics simulation
  • SARS-CoV-2 main protease

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